Dive deeper into your data; find insights that make your science stand out.
Do you need to use flow or mass cytometry to analyze a large number of samples? Are you in awe of how to extract meaningful, high-confidence findings from the massive output?
Cytometry data have evolved in size and complexity, but software to analyze these data has not advanced as much. Challenges with the conventional software include: slow speed; exporting data several times to multiple software from start to end – for visualization, analysis, and statistics; cumbersome data transfer between software; and often incompliance with clinical studies.
To address these gaps, scientists at CellCarta have developed a cloud-based cytometry analysis software, CellEngineTM. CellEngine contains all the primary features of the current cytometry software and additional features to analyze a few thousand samples seamlessly, within seconds, in one platform.
Analysis and visualization of cytometry data got simpler and more reliable with these advanced CellEngine features:
- Cloud-Based and Advanced API System.
The use of the cloud-based system and Application Programming Interface (API) offers special features over other cytometry programs on the market:
– Centrally organized data prime remote teamwork and new collaborations,
– High-speed analysis,
– Secure data transfer and easy integration between programs, such as bioinformatics pipelines, Electronic Laboratory Notebooks, Laboratory Information Management Systems, etc. API toolkits support R and Python to run cutting-edge visualization algorithms in the browser without installing the programs.
- Unprecedented Speed.
The advanced technologies let CellEngine analyze several hundred gigabyte-sized data in seconds whereas conventional software takes hours or may fail in cases of big data or complex analysis. The largest CellEngine experiment analyzed 30,000 FCS files. Large sample numbers, large panels, and numerous parameters have made CellEngine uniquely suited to analyze longitudinal studies.
- Advanced Visualization and Metadata-Driven Analysis.
Besides faster analysis, CellEngine can quickly generate complex visualizations, such as heatmaps, flow plot overlays, dose-response curves, etc. Moreover, CellEngine can run cutting-edge clustering algorithms like t-SNE, FlowSOM, PhenoGraph, PCA, UMAP, etc., on millions of cells in seconds to minutes.
Another element of CellEngine that makes data analysis user-friendly is its metadata-driven layouts. Annotate the experimental conditions you are interested in; the layouts will be made in seconds. These layouts are convenient to examine large panels in a single coherent view. Combined with the statistical packages, you will extract the most reliable insights from your data.
- Regulatory Compliance.
CellEngine meets the regulatory compliance with 21CFR11, which adds a cherry on the top by allowing clinical data analysis, unlike other cytometry software. Besides, CellEngine is tested regularly for consistency and reproducibility.
- Compatibility.
Interested to try out this awesome software? Migration to CellEngine is simple. CellEngine is compatible with the FCS file formats generated by most cytometers. The ability to export analyses in various standard formats makes the transition to CellEngine seamless.
To sum up, CellEngine’s robust platform and easy-to-use design ensure reduced error and the highest quality in data analysis from start to end. Dive deeper into your data with CellEngine; find insights that make your science stand out.